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Biology/Viral integration

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Question
Hello,
I was just wondering is there an assay or some way to determine where within a genome a retrovirus is integrated? I understand it can be site-specific or random, but is there any way to tell where it did integrate? Thanks!

Answer
Hi Brett:  Thanks for your question.

The virus will integrate anywhere in the genome, but to detect its location, you need special tools.

Often these tools use PCR (polymerase chain reaction) kits, or antibody mediated detection methods.

Here are some references.

http://www.bioworldantibodies.com/info/episomaldescription.pdf

http://nar.oxfordjournals.org/cgi/content/full/25/21/4419

http://content.nejm.org/cgi/content/full/357/11/1156

Take a look at these sites and if you have more questions, I'll be glad to help you.

FM Rollwagen, PhD

Biology

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Florence M Rollwagen

Expertise

I can answer questions in biology, microbiology and immunology on the undergraduate or graduate level. I can also address medical and health concerns regarding alternative medicine, autoimmune diseases (lupus, MS) liver disease and intestinal problems.

Experience

I have over 20 years experience in research and teaching at the medical/graduate level, and 5 years teaching college biology and microbiology. My expertise is in microbiology and immunology, specifically the biology of cytokines and soluble immune response modifiers. I also carried out original research in blood substitutes and shock/trauma.

Organizations
American Association of Immunologists (AAI) American Association for the Advancement of Science (AAAS)

Publications
Journal of Experimental Medicine, Journal of Immunology, Cytokine, Shock, Experimental Hematology

Education/Credentials
BS biology 1966 MS biology 1968 PhD immunology 1979

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